Sequence Similarity Clusters for the Entities in PDB 1E8H

Entity #1 | Chains: A,B
VANILLYL-ALCOHOL OXIDASE protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 11433
95 % 11 18 1497 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 11 18 1529
70 % 11 18 1540
50 % 11 18 1591
40 % 15 22 1318
30 % 19 26 1127

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures