Sequence Similarity Clusters for the Entities in PDB 1E8H

Entity #1 | Chains: A,B
VANILLYL-ALCOHOL OXIDASE protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 11175
95 % 11 18 1463 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 11 18 1492
70 % 11 18 1501
50 % 11 18 1557
40 % 15 22 1287
30 % 19 26 1107

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.