Sequence Similarity Clusters for the Entities in PDB 1E8G

Entity #1 | Chains: A,B
VANILLYL-ALCOHOL OXIDASE protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 11165
95 % 1 18 1461 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 18 1490
70 % 1 18 1500
50 % 1 18 1556
40 % 4 22 1287
30 % 6 26 1105

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.