Sequence Similarity Clusters for the Entities in PDB 1E8G

Entity #1 | Chains: A,B
VANILLYL-ALCOHOL OXIDASE protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 11631
95 % 1 18 1521 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 18 1550
70 % 1 18 1564
50 % 1 18 1620
40 % 4 22 1333
30 % 6 26 1141

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures