Sequence Similarity Clusters for the Entities in PDB 1E8F

Entity #1 | Chains: A,B
VANILLYL-ALCOHOL OXIDASE protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 10765
95 % 15 16 1607 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 15 16 1643
70 % 15 16 1675
50 % 15 16 1719
40 % 19 20 1371
30 % 23 24 1147

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.