Sequence Similarity Clusters for the Entities in PDB 1E7P

Entity #1 | Chains: A,D,G,J
FUMARATE REDUCTASE FLAVOPROTEIN SUBUNIT protein, length: 656 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 7382
95 % 5 5 6165 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 5 5 6160
70 % 5 5 5993
50 % 5 5 5620
40 % 5 5 5252
30 % 68 75 478
Entity #2 | Chains: B,E,H,K
FUMARATE REDUCTASE IRON-SULFUR PROTEIN protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 5948
95 % 5 5 6164 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 5 5 6159
70 % 5 5 5992
50 % 5 5 5619
40 % 5 5 5251
30 % 61 68 515
Entity #3 | Chains: C,F,I,L
FUMARATE REDUCTASE CYTOCHROME B SUBUNIT protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 6831
95 % 5 5 6418 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 5 5 6408
70 % 5 5 6218
50 % 5 5 5817
40 % 5 5 5418
30 % 5 5 4765

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures