Sequence Similarity Clusters for the Entities in PDB 1E7P

Entity #1 | Chains: A,D,G,J
FUMARATE REDUCTASE FLAVOPROTEIN SUBUNIT protein, length: 656 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 5969
95 % 5 5 5315 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 5 5 5340
70 % 5 5 5257
50 % 5 5 5016
40 % 5 5 4745
30 % 66 73 462
Entity #2 | Chains: B,E,H,K
FUMARATE REDUCTASE IRON-SULFUR PROTEIN protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 5072
95 % 5 5 5782 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 5 5 5797
70 % 5 5 5679
50 % 5 5 5352
40 % 5 5 5035
30 % 61 68 484
Entity #3 | Chains: C,F,I,L
FUMARATE REDUCTASE CYTOCHROME B SUBUNIT protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 20331
95 % 5 5 5743 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 5 5 5755
70 % 5 5 5647
50 % 5 5 5324
40 % 5 5 5012
30 % 5 5 4536

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures