Sequence Similarity Clusters for the Entities in PDB 1E79

Entity #1 | Chains: A,B,C
ATP SYNTHASE ALPHA CHAIN HEART ISOFORM protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 29 302
95 % 8 41 278 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.1
PDBFlex
90 % 8 41 290
70 % 9 59 167
50 % 10 71 168
40 % 10 71 183
30 % 10 71 201
Entity #2 | Chains: D,E,F
ATP SYNTHASE BETA CHAIN protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 40 206
95 % 8 42 279 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.0
PDBFlex
90 % 8 42 291
70 % 10 72 139
50 % 10 72 169
40 % 10 72 184
30 % 10 72 202
Entity #3 | Chains: G
ATP SYNTHASE GAMMA CHAIN protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 39 882
95 % 8 39 1190
90 % 8 39 1217
70 % 8 41 1191
50 % 8 41 1247
40 % 8 65 631
30 % 8 65 621
Entity #4 | Chains: H
ATP SYNTHASE DELTA CHAIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 15 3403
95 % 5 15 4172 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 5 15 4200
70 % 5 15 4137
50 % 5 15 3986
40 % 5 15 3815
30 % 5 29 1303
Entity #5 | Chains: I
ATP SYNTHASE EPSILON CHAIN protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 19 2568
95 % 5 19 3198 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 5 19 3241
70 % 5 19 3213
50 % 5 19 3136
40 % 5 19 3059
30 % 5 19 2866

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2JDI 5 I ATP SYNTHASE EPSILON CHAIN 9913 3.6.3.14 | Details
2 2CK3 5 I ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL 9913 3.6.3.14 | Details
3 1H8E 5 I BOVINE MITOCHONDRIAL F1-ATPASE 9913 3.6.3.14 | Details
4 2V7Q 5 I ATP SYNTHASE EPSILON CHAIN 9913 3.6.1.14 | Details
5 1E79 5 I ATP SYNTHASE EPSILON CHAIN 9913 3.6.3.14 | Details
6 4ASU 5 I ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL 9913
7 4YXW 5 I ATP synthase subunit epsilon, mitochondrial 9913
8 2WSS 5 I, R ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL 9913
9 2XND 5 I ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL RESIDUES 2-48 9913 3.6.3.14 | Details
10 2W6J 5 I ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL 9913 3.6.3.14 | Details
11 2W6I 5 I ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL 9913 3.6.3.14 | Details
12 2W6H 5 I ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL 9913 3.6.3.14 | Details
13 5FIJ 5 I ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL UNP RESIDUES 2-51 9913
14 5FIK 5 I ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL UNP RESIDUES 2-51 9913
15 5FIL 5 I ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL UNP RESIDUES 2-51 9913
16 5ARA 5 I ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL UNP RESIDUES 2-51 9913
17 5ARE 5 I ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL UNP RESIDUES 2-51 9913
18 5ARH 5 I ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL UNP RESIDUES 2-51 9913
19 5ARI 5 I ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL UNP RESIDUES 2-51 9913