Sequence Similarity Clusters for the Entities in PDB 1E79

Entity #1 | Chains: A,B,C
ATP SYNTHASE ALPHA CHAIN HEART ISOFORM protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 29 301
95 % 8 41 277 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.1
PDBFlex
90 % 8 41 289
70 % 9 59 167
50 % 10 71 168
40 % 10 71 183
30 % 10 71 200
Entity #2 | Chains: D,E,F
ATP SYNTHASE BETA CHAIN protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 40 206
95 % 8 42 278 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.0
PDBFlex
90 % 8 42 290
70 % 10 72 139
50 % 10 72 169
40 % 10 72 184
30 % 10 72 201
Entity #3 | Chains: G
ATP SYNTHASE GAMMA CHAIN protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 39 881
95 % 8 39 1188
90 % 8 39 1215
70 % 8 41 1189
50 % 8 41 1245
40 % 8 65 629
30 % 8 65 619
Entity #4 | Chains: H
ATP SYNTHASE DELTA CHAIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 15 3398
95 % 5 15 4165 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 5 15 4194
70 % 5 15 4130
50 % 5 15 3978
40 % 5 15 3808
30 % 5 29 1300
Entity #5 | Chains: I
ATP SYNTHASE EPSILON CHAIN protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 19 2562
95 % 5 19 3189 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 5 19 3233
70 % 5 19 3204
50 % 5 19 3123
40 % 5 19 3049
30 % 5 19 2859

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2JDI 4 H ATP SYNTHASE DELTA CHAIN RESIDUES 23-168 9913 3.6.3.14 | Details
2 2CK3 4 H ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL 9913 3.6.3.14 | Details
3 1H8E 4 H BOVINE MITOCHONDRIAL F1-ATPASE 9913 3.6.3.14 | Details
4 2V7Q 4 H ATP SYNTHASE DELTA CHAIN RESIDUES 23-168 9913 3.6.1.14 | Details
5 1E79 4 H ATP SYNTHASE DELTA CHAIN 9913 3.6.3.14 | Details
6 4ASU 4 H ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL 9913
7 4YXW 4 H ATP synthase subunit delta, mitochondrial 9913
8 2WSS 4 H, Q ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL 9913
9 5FIJ 4 H ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL UNP RESIDUES 23-168 9913
10 5FIK 4 H ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL UNP RESIDUES 23-168 9913
11 5FIL 4 H ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL UNP RESIDUES 23-168 9913
12 5ARA 4 H ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL UNP RESIDUES 23-168 9913
13 5ARE 4 H ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL UNP RESIDUES 23-168 9913
14 5ARH 4 H ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL UNP RESIDUES 23-168 9913
15 5ARI 4 H ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL UNP RESIDUES 23-168 9913