Sequence Similarity Clusters for the Entities in PDB 1E79

Entity #1 | Chains: A,B,C
ATP SYNTHASE ALPHA CHAIN HEART ISOFORM protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 29 302
95 % 8 41 278 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.1
PDBFlex
90 % 8 41 290
70 % 9 59 167
50 % 10 71 168
40 % 10 71 183
30 % 10 71 201
Entity #2 | Chains: D,E,F
ATP SYNTHASE BETA CHAIN protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 40 206
95 % 8 42 279 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.0
PDBFlex
90 % 8 42 291
70 % 10 72 139
50 % 10 72 169
40 % 10 72 184
30 % 10 72 202
Entity #3 | Chains: G
ATP SYNTHASE GAMMA CHAIN protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 39 882
95 % 8 39 1190
90 % 8 39 1217
70 % 8 41 1191
50 % 8 41 1247
40 % 8 65 631
30 % 8 65 621
Entity #4 | Chains: H
ATP SYNTHASE DELTA CHAIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 15 3403
95 % 5 15 4172 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 5 15 4200
70 % 5 15 4137
50 % 5 15 3986
40 % 5 15 3815
30 % 5 29 1303
Entity #5 | Chains: I
ATP SYNTHASE EPSILON CHAIN protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 19 2568
95 % 5 19 3198 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 5 19 3241
70 % 5 19 3213
50 % 5 19 3136
40 % 5 19 3059
30 % 5 19 2866

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2JDI 3 G ATP SYNTHASE GAMMA CHAIN RESIDUES 26-298 9913 3.6.3.14 | Details
2 2CK3 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 3.6.3.14 | Details
3 1H8E 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 3.6.3.14 | Details
4 2V7Q 3 G ATP SYNTHASE GAMMA CHAIN RESIDUES 26-297 9913 3.6.3.14 | Details
5 2JIZ 3 G, N ATP SYNTHASE GAMMA CHAIN RESIDUES 26-297 9913 3.6.3.14 | Details
6 1W0J 3 G ATP SYNTHASE GAMMA CHAIN, MITOCHONDRIAL PRECURSOR 9913 3.6.3.14 | Details
7 2JJ2 3 G, N ATP SYNTHASE GAMMA CHAIN RESIDUES 26-297 9913 3.6.3.14 | Details
8 1E79 3 G ATP SYNTHASE GAMMA CHAIN 9913 3.6.3.14 | Details
9 1E1R 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 3.6.3.14 | Details
10 2JJ1 3 G, N ATP SYNTHASE GAMMA CHAIN RESIDUES 26-297 9913 3.6.3.14 | Details
11 1E1Q 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 3.6.3.14 | Details
12 1EFR 3 G BOVINE MITOCHONDRIAL F1-ATPASE SUBUNIT GAMMA 9913 3.6.3.14 | Details
13 1MAB 3 G PROTEIN (F1-ATPASE GAMMA CHAIN) GAMMA CHAIN 10116 3.6.3.14 | Details
14 4ASU 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913
15 1NBM 4 G F1-ATPASE 9913 3.6.3.14 | Details
16 1W0K 3 G ATP SYNTHASE GAMMA CHAIN, MITOCHONDRIAL PRECURSOR 9913 3.6.3.14 | Details
17 1OHH 3 G ATP synthase subunit gamma, mitochondrial 9913
18 1H8H 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 3.6.3.14 | Details
19 4YXW 3 G ATP synthase subunit gamma, mitochondrial 9913
20 2WSS 3 G, P ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL HEART ISOFORM, RESIDUES 26-297 9913
21 4TSF 3 G ATP synthase subunit gamma, mitochondrial 9913
22 4TT3 3 G ATP synthase subunit gamma, mitochondrial 9913
23 4Z1M 3 G ATP synthase subunit gamma, mitochondrial 9913
24 1COW 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 3.6.3.14 | Details
25 2F43 3 G ATP synthase gamma chain, mitochondrial 10116 3.6.3.14 | Details
26 2XND 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL RESIDUES 26-297 9913 3.6.3.14 | Details
27 2W6J 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 3.6.3.14 | Details
28 2W6I 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 3.6.3.14 | Details
29 2W6H 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 3.6.3.14 | Details
30 2W6E 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 3.6.3.14 | Details
31 2W6G 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 3.6.3.14 | Details
32 2W6F 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 3.6.3.14 | Details
33 5FIJ 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
34 5FIK 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
35 5FIL 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
36 5ARA 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
37 5ARE 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
38 5ARH 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
39 5ARI 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
40 1QO1 3 G ATP SYNTHASE GAMMA CHAIN THE BOS TAURUS (BOVINE) ATP SYNTHASE GAMMA CHAIN SEQUENCE (SWISSPROT P05631) AND MODEL (PDB ENTRY 1BMF) ARE GIVEN IN THE COORDINATES OF THIS ENTRY 4932 3.6.3.14 | Details
41 1BMF 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 3.6.3.14 | Details