Sequence Similarity Clusters for the Entities in PDB 1E79

Entity #1 | Chains: A,B,C
ATP SYNTHASE ALPHA CHAIN HEART ISOFORM protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 29 344
95 % 8 41 287 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.1
PDBFlex
90 % 8 41 301
70 % 9 59 170
50 % 10 71 172
40 % 10 71 186
30 % 10 71 201
Entity #2 | Chains: D,E,F
ATP SYNTHASE BETA CHAIN protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 40 211
95 % 8 42 288 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.1
PDBFlex
90 % 8 42 302
70 % 10 72 143
50 % 10 72 173
40 % 10 72 187
30 % 10 72 202
Entity #3 | Chains: G
ATP SYNTHASE GAMMA CHAIN protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 39 905
95 % 8 39 1210 Flexibility: Medium
Max RMSD: 8.0, Avg RMSD: 3.2
PDBFlex
90 % 8 39 1238
70 % 8 41 1208
50 % 8 41 1265
40 % 8 65 638
30 % 8 65 626
Entity #4 | Chains: H
ATP SYNTHASE DELTA CHAIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 15 3468
95 % 5 15 4239 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 5 15 4270
70 % 5 15 4194
50 % 5 15 4032
40 % 5 15 3859
30 % 5 29 1317
Entity #5 | Chains: I
ATP SYNTHASE EPSILON CHAIN protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 19 2633
95 % 5 19 3259 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 5 19 3305
70 % 5 19 3266
50 % 5 19 3176
40 % 5 19 3094
30 % 5 19 2900

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2JDI 3 G ATP SYNTHASE GAMMA CHAIN RESIDUES 26-298 9913 3.6.3.14 | Details
2 2CK3 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 3.6.3.14 | Details
3 1H8E 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 3.6.3.14 | Details
4 2V7Q 3 G ATP SYNTHASE GAMMA CHAIN RESIDUES 26-297 9913 3.6.3.14 | Details
5 2JIZ 3 G, N ATP SYNTHASE GAMMA CHAIN RESIDUES 26-297 9913 3.6.3.14 | Details
6 1W0J 3 G ATP SYNTHASE GAMMA CHAIN, MITOCHONDRIAL PRECURSOR 9913 3.6.3.14 | Details
7 2JJ2 3 G, N ATP SYNTHASE GAMMA CHAIN RESIDUES 26-297 9913 3.6.3.14 | Details
8 1E79 3 G ATP SYNTHASE GAMMA CHAIN 9913 3.6.3.14 | Details
9 1E1R 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 3.6.3.14 | Details
10 3ZIA 3 G, Q ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 4932
11 5IK2 3 G, O ATP synthase gamma chain 296745
12 2JJ1 3 G, N ATP SYNTHASE GAMMA CHAIN RESIDUES 26-297 9913 3.6.3.14 | Details
13 3OEE 3 G, P, Y ATP synthase subunit gamma UNP RESIDUES 34-311 4932 3.6.3.14 | Details
14 1E1Q 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 3.6.3.14 | Details
15 2HLD 3 G, P, Y ATP synthase gamma chain, mitochondrial 4932 3.6.3.14 | Details
16 1EFR 3 G BOVINE MITOCHONDRIAL F1-ATPASE SUBUNIT GAMMA 9913 3.6.3.14 | Details
17 1MAB 3 G PROTEIN (F1-ATPASE GAMMA CHAIN) GAMMA CHAIN 10116 3.6.3.14 | Details
18 4ASU 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913
19 5HKK 3 G, O ATP synthase gamma chain 296745
20 1NBM 4 G F1-ATPASE 9913 3.6.3.14 | Details
21 1W0K 3 G ATP SYNTHASE GAMMA CHAIN, MITOCHONDRIAL PRECURSOR 9913 3.6.3.14 | Details
22 1OHH 3 G ATP synthase subunit gamma, mitochondrial 9913
23 3OEH 3 G, P, Y ATP synthase subunit gamma UNP RESIDUES 34-311 4932 3.6.3.14 | Details
24 2XOK 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 4932
25 3OE7 3 G, P, Y ATP synthase subunit gamma UNP RESIDUES 34-311 4932 3.6.3.14 | Details
26 1H8H 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 3.6.3.14 | Details
27 3OFN 3 G, P, Y ATP synthase subunit gamma UNP RESIDUES 34-311 4932 3.6.3.14 | Details
28 4YXW 3 G ATP synthase subunit gamma, mitochondrial 9913
29 2WSS 3 G, P ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL HEART ISOFORM, RESIDUES 26-297 9913
30 4TSF 3 G ATP synthase subunit gamma, mitochondrial 9913
31 2QE7 3 G ATP synthase subunit gamma 90973 3.6.3.14 | Details
32 4TT3 3 G ATP synthase subunit gamma, mitochondrial 9913
33 3OAA 3 G, O, W, e ATP synthase gamma chain 562
34 4Z1M 3 G ATP synthase subunit gamma, mitochondrial 9913
35 1COW 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 3.6.3.14 | Details
36 3FKS 3 G, P, Y ATP synthase subunit gamma, mitochondrial UNP residues 34-311 4932 3.6.3.14 | Details
37 2F43 3 G ATP synthase gamma chain, mitochondrial 10116 3.6.3.14 | Details
38 2XND 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL RESIDUES 26-297 9913 3.6.3.14 | Details
39 5FL7 3 G ATP SYNTHASE SUBUNIT GAMMA CHAIN, MITOCHONDRIAL 4952 3.6.3.14 | Details
40 4XD7 3 G ATP synthase gamma chain 2334
41 2WPD 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 4932
42 2W6J 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 3.6.3.14 | Details
43 5DN6 6 G ATP synthase gamma chain 266
44 2W6I 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 3.6.3.14 | Details
45 2W6H 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 3.6.3.14 | Details
46 2W6E 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 3.6.3.14 | Details
47 2W6G 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 3.6.3.14 | Details
48 3ZRY 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 4932
49 2W6F 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL 9913 3.6.3.14 | Details
50 5T4O 3 G ATP synthase gamma chain 562
51 5T4P 3 G ATP synthase gamma chain 562
52 5T4Q 3 G ATP synthase gamma chain 562
53 5LQX 7 G ATP synthase gamma subunit 870730
54 5LQY 7 G ATP synthase gamma subunit 870730
55 5LQZ 7 G ATP synthase gamma subunit 870730
56 5FIJ 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
57 5FIK 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
58 5FIL 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
59 5ARA 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
60 5ARE 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
61 5ARH 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
62 5ARI 3 G ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL UNP RESIDUES 26-298 9913
63 4B2Q 5 G, g ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL RESIDUES 34-311 4932
64 1QO1 3 G ATP SYNTHASE GAMMA CHAIN THE BOS TAURUS (BOVINE) ATP SYNTHASE GAMMA CHAIN SEQUENCE (SWISSPROT P05631) AND MODEL (PDB ENTRY 1BMF) ARE GIVEN IN THE COORDINATES OF THIS ENTRY 4932 3.6.3.14 | Details
65 1BMF 3 G BOVINE MITOCHONDRIAL F1-ATPASE 9913 3.6.3.14 | Details