Sequence Similarity Clusters for the Entities in PDB 1E79

Entity #1 | Chains: A,B,C
ATP SYNTHASE ALPHA CHAIN HEART ISOFORM protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 29 307
95 % 8 41 285 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.1
PDBFlex
90 % 8 41 298
70 % 9 59 170
50 % 10 71 172
40 % 10 71 186
30 % 10 71 201
Entity #2 | Chains: D,E,F
ATP SYNTHASE BETA CHAIN protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 40 210
95 % 8 42 286 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.1
PDBFlex
90 % 8 42 299
70 % 10 72 143
50 % 10 72 173
40 % 10 72 187
30 % 10 72 202
Entity #3 | Chains: G
ATP SYNTHASE GAMMA CHAIN protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 39 902
95 % 8 39 1207 Flexibility: Medium
Max RMSD: 8.0, Avg RMSD: 3.2
PDBFlex
90 % 8 39 1235
70 % 8 41 1206
50 % 8 41 1264
40 % 8 65 637
30 % 8 65 625
Entity #4 | Chains: H
ATP SYNTHASE DELTA CHAIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 15 3461
95 % 5 15 4231 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 5 15 4263
70 % 5 15 4187
50 % 5 15 4027
40 % 5 15 3854
30 % 5 29 1316
Entity #5 | Chains: I
ATP SYNTHASE EPSILON CHAIN protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 19 2622
95 % 5 19 3250 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 5 19 3295
70 % 5 19 3254
50 % 5 19 3171
40 % 5 19 3091
30 % 5 19 2897

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2JDI 2 D, E, F ATP SYNTHASE SUBUNIT BETA RESIDUES 47-528 9913 3.6.3.14 | Details
2 2CK3 2 D, E, F ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL 9913 3.6.3.14 | Details
3 1H8E 2 D, E, F BOVINE MITOCHONDRIAL F1-ATPASE 9913 3.6.3.14 | Details
4 2V7Q 2 D, E, F ATP SYNTHASE SUBUNIT BETA RESIDUES 47-528 9913 3.6.3.14 | Details
5 2JIZ 2 D, E, F, K, L, M ATP SYNTHASE SUBUNIT BETA RESIDUES 47-528 9913 3.6.3.14 | Details
6 1W0J 2 D, E, F ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PRECURSOR 9913 3.6.3.14 | Details
7 4Q4L 1 A ATP synthase subunit beta 1 57975 3.6.3.14 | Details
8 2JJ2 2 D, E, F, K, L, M ATP SYNTHASE SUBUNIT BETA RESIDUES 47-528 9913 3.6.3.14 | Details
9 5CDF 2 E ATP synthase subunit beta 266 3.6.3.14 | Details
10 1E79 2 D, E, F ATP SYNTHASE BETA CHAIN 9913 3.6.3.14 | Details
11 1E1R 2 D, E, F BOVINE MITOCHONDRIAL F1-ATPASE 9913 3.6.3.14 | Details
12 3ZIA 2 D, E, F, N, O, P ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL 4932 3.6.3.14 | Details
13 5IK2 2 D, E, F, L, M, N ATP synthase subunit beta 296745 3.6.3.14 | Details
14 2JJ1 2 D, E, F, K, L, M ATP SYNTHASE SUBUNIT BETA RESIDUES 47-528 9913 3.6.3.14 | Details
15 3OEE 2 D, E, F, M, N, O, V, W, X ATP synthase subunit beta UNP RESIDUES 34-511 4932 3.6.3.14 | Details
16 1E1Q 2 D, E, F BOVINE MITOCHONDRIAL F1-ATPASE 9913 3.6.3.14 | Details
17 2HLD 2 D, E, F, M, N, O, V, W, X ATP synthase beta chain, mitochondrial 4932 3.6.3.14 | Details
18 1EFR 2 D, E, F BOVINE MITOCHONDRIAL F1-ATPASE SUBUNIT BETA 9913 3.6.3.14 | Details
19 1MAB 2 B PROTEIN (F1-ATPASE BETA CHAIN) BETA CHAIN 10116 3.6.3.14 | Details
20 4ASU 2 D, E, F ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL 9913 3.6.3.14 | Details
21 5HKK 2 D, E, F, L, M, N ATP synthase subunit beta 296745 3.6.3.14 | Details
22 1NBM 2 D, F F1-ATPASE 9913 3.6.3.14 | Details
23 1NBM 3 E F1-ATPASE 9913 3.6.3.14 | Details
24 1W0K 2 D, E, F ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PRECURSOR 9913 3.6.3.14 | Details
25 1OHH 2 D, E, F ATP synthase subunit beta, mitochondrial 9913 3.6.3.14 | Details
26 3OEH 2 D, E, F, M, N, O, V, W, X ATP synthase subunit beta UNP RESIDUES 34-511 4932 3.6.3.14 | Details
27 2XOK 2 D, E, F ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL 4932 3.6.3.14 | Details
28 3OE7 2 D, E, F, M, N, O, V, W, X ATP synthase subunit beta UNP RESIDUES 34-511 4932 3.6.3.14 | Details
29 1H8H 2 D, E, F BOVINE MITOCHONDRIAL F1-ATPASE 9913 3.6.3.14 | Details
30 3OFN 2 D, E, F, M, N, O, V, W, X ATP synthase subunit beta UNP RESIDUES 34-511 4932 3.6.3.14 | Details
31 4YXW 2 D, E, F ATP synthase subunit beta, mitochondrial 9913 3.6.3.14 | Details
32 2WSS 2 D, E, F, M, N, O ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL RESIDUES 47-528 9913 3.6.3.14 | Details
33 1SKY 2 E F1-ATPASE 2334 3.6.3.14 | Details
34 4TSF 2 D, E, F ATP synthase subunit beta, mitochondrial 9913 3.6.3.14 | Details
35 2QE7 2 D, E, F ATP synthase subunit beta 90973 3.6.3.14 | Details
36 4TT3 2 D, E, F ATP synthase subunit beta, mitochondrial 9913 3.6.3.14 | Details
37 3OAA 2 D, E, F, L, M, N, T, U, V, b, c, d ATP synthase subunit beta 562 3.6.3.14 | Details
38 4Z1M 2 D, E, F ATP synthase subunit beta, mitochondrial 9913 3.6.3.14 | Details
39 1COW 2 D, E, F BOVINE MITOCHONDRIAL F1-ATPASE 9913 3.6.3.14 | Details
40 3FKS 2 D, E, F, M, N, O, V, W, X ATP synthase subunit beta, mitochondrial UNP residues 34-511 4932 3.6.3.14 | Details
41 2F43 2 B ATP synthase beta chain, mitochondrial 10116 3.6.3.14 | Details
42 2XND 2 D, E, F ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL RESIDUES 59-525 9913 3.6.3.14 | Details
43 5FL7 2 D, E, F ATP SYNTHASE SUBUNIT BETA 4952 3.6.3.14 | Details
44 4XD7 2 D, E, F ATP synthase subunit beta 2334 3.6.3.14 | Details
45 2WPD 2 D, E, F ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL 4932 3.6.3.14 | Details
46 1KMH 2 B ATPase beta subunit 3562 3.6.3.14 | Details
47 1FX0 2 B ATP SYNTHASE BETA CHAIN 3562 3.6.3.14 | Details
48 2W6J 2 D, E, F ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL 9913 3.6.3.14 | Details
49 5DN6 5 D, E, F ATP synthase subunit beta 266 3.6.3.14 | Details
50 2W6I 2 D, E, F ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL 9913 3.6.3.14 | Details
51 2W6H 2 D, E, F ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL 9913 3.6.3.14 | Details
52 2W6E 2 D, E, F ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL 9913 3.6.3.14 | Details
53 2W6G 2 D, E, F ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL 9913 3.6.3.14 | Details
54 3ZRY 2 D, E, F ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL 4932 3.6.3.14 | Details
55 2W6F 2 D, E, F ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL 9913 3.6.3.14 | Details
56 5T4O 2 D, E, F ATP synthase subunit beta 562 3.6.3.14 | Details
57 5T4P 2 D, E, F ATP synthase subunit beta 562 3.6.3.14 | Details
58 5T4Q 2 D, E, F ATP synthase subunit beta 562 3.6.3.14 | Details
59 5LQX 6 D, E, F ATP synthase beta subunit 870730 3.6.3.14 | Details
60 5LQY 6 D, E, F ATP synthase beta subunit 870730 3.6.3.14 | Details
61 5LQZ 6 D, E, F ATP synthase beta subunit 870730 3.6.3.14 | Details
62 5FIJ 2 D, E, F ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL UNP RESIDUES 47-528 9913 3.6.3.14 | Details
63 5FIK 2 D, E, F ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL UNP RESIDUES 47-528 9913 3.6.3.14 | Details
64 5FIL 2 D, E, F ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL UNP RESIDUES 47-528 9913 3.6.3.14 | Details
65 5ARA 2 D, E, F ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL UNP RESIDUES 47-528 9913 3.6.3.14 | Details
66 5ARE 2 D, E, F ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL UNP RESIDUES 47-528 9913 3.6.3.14 | Details
67 5ARH 2 D, E, F ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL UNP RESIDUES 47-528 9913 3.6.3.14 | Details
68 5ARI 2 D, E, F ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL UNP RESIDUES 47-528 9913 3.6.3.14 | Details
69 4B2Q 3 D, d ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL RESIDUES 39-508 4932 3.6.3.14 | Details
70 4B2Q 4 E, F, e, f ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL RESIDUES 39-511 4932 3.6.3.14 | Details
71 1QO1 2 D, E, F ATP SYNTHASE BETA CHAIN THE BOS TAURUS (BOVINE) ATP SYNTHASE BETA CHAIN SEQUENCE (SWISSPROT P00829) AND MODEL (PDB ENTRY 1BMF) ARE GIVEN IN THE COORDINATES OF THIS ENTRY 4932 3.6.3.14 | Details
72 1BMF 2 D, E, F BOVINE MITOCHONDRIAL F1-ATPASE 9913 3.6.3.14 | Details