POP-OUT | CLOSE

An Information Portal to 108395 Biological Macromolecular Structures

Bovine F1-ATPase inhibited by DCCD (dicyclohexylcarbodiimide)
Sequence Clustering and Redundancy Reduction Results
1E79
Sequence Clusters for the Sequence Entities in PDB 1E79
Entity #1: Chains: A,B,C - ATP SYNTHASE ALPHA CHAIN HEART ISOFORM protein, length: 510 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 20 350
95% 8 32 284
90% 8 32 299
70% 8 44 149
50% 9 50 160
40% 9 50 182
30% 9 50 200
Entity #2: Chains: D,E,F - ATP SYNTHASE BETA CHAIN protein, length: 482 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 31 208
95% 8 33 285
90% 8 33 300
70% 9 51 121
50% 9 51 161
40% 9 51 183
30% 9 51 201
Entity #3: Chains: G - ATP SYNTHASE GAMMA CHAIN protein, length: 272 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 30 873
95% 8 30 1230
90% 8 30 1246
70% 8 32 1204
50% 8 32 1264
40% 8 43 722
30% 8 45 658
Entity #4: Chains: H - ATP SYNTHASE DELTA CHAIN protein, length: 146 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 7 7259
95% 5 7 7537
90% 5 7 7473
70% 5 7 7177
50% 5 7 6560
40% 5 7 6051
30% 5 18 1436
Entity #5: Chains: I - ATP SYNTHASE EPSILON CHAIN protein, length: 50 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 11 4210
95% 5 11 4778
90% 5 11 4788
70% 5 11 4718
50% 5 11 4473
40% 5 11 4214
30% 5 11 3814
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.