Sequence Similarity Clusters for the Entities in PDB 1E79

Entity #1 | Chains: A,B,C
ATP SYNTHASE ALPHA CHAIN HEART ISOFORM protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 29 259
95 % 8 41 255
90 % 8 41 263
70 % 9 59 158
50 % 10 71 155
40 % 10 71 172
30 % 10 71 188
Entity #2 | Chains: D,E,F
ATP SYNTHASE BETA CHAIN protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 40 188
95 % 8 42 256
90 % 8 42 264
70 % 10 72 127
50 % 10 72 156
40 % 10 72 173
30 % 10 72 189
Entity #3 | Chains: G
ATP SYNTHASE GAMMA CHAIN protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 39 809
95 % 8 39 1111
90 % 8 39 1135
70 % 8 41 1119
50 % 8 41 1172
40 % 8 65 588
30 % 8 65 585
Entity #4 | Chains: H
ATP SYNTHASE DELTA CHAIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 15 3169
95 % 5 15 3907
90 % 5 15 3932
70 % 5 15 3861
50 % 5 15 3746
40 % 5 15 3596
30 % 5 29 1217
Entity #5 | Chains: I
ATP SYNTHASE EPSILON CHAIN protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 19 2378
95 % 5 19 2995
90 % 5 19 3038
70 % 5 19 3014
50 % 5 19 2941
40 % 5 19 2867
30 % 5 19 2692

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.