Sequence Similarity Clusters for the Entities in PDB 1E79

Entity #1 | Chains: A,B,C
ATP SYNTHASE ALPHA CHAIN HEART ISOFORM protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 29 275
95 % 8 41 267
90 % 8 41 276
70 % 9 59 165
50 % 10 71 163
40 % 10 71 179
30 % 10 71 193
Entity #2 | Chains: D,E,F
ATP SYNTHASE BETA CHAIN protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 40 198
95 % 8 42 268
90 % 8 42 277
70 % 10 72 136
50 % 10 72 164
40 % 10 72 180
30 % 10 72 194
Entity #3 | Chains: G
ATP SYNTHASE GAMMA CHAIN protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 39 839
95 % 8 39 1145
90 % 8 39 1174
70 % 8 41 1152
50 % 8 41 1209
40 % 8 65 604
30 % 8 65 602
Entity #4 | Chains: H
ATP SYNTHASE DELTA CHAIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 15 3263
95 % 5 15 4021
90 % 5 15 4042
70 % 5 15 3965
50 % 5 15 3840
40 % 5 15 3685
30 % 5 29 1259
Entity #5 | Chains: I
ATP SYNTHASE EPSILON CHAIN protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 19 2459
95 % 5 19 3081
90 % 5 19 3122
70 % 5 19 3093
50 % 5 19 3019
40 % 5 19 2953
30 % 5 19 2764

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.