Sequence Similarity Clusters for the Entities in PDB 1E79

Entity #1 | Chains: A,B,C
ATP SYNTHASE ALPHA CHAIN HEART ISOFORM protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 29 249
95 % 8 41 243
90 % 8 41 252
70 % 9 56 157
50 % 10 65 161
40 % 10 65 176
30 % 10 65 190
Entity #2 | Chains: D,E,F
ATP SYNTHASE BETA CHAIN protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 40 180
95 % 8 42 244
90 % 8 42 253
70 % 10 66 135
50 % 10 66 162
40 % 10 66 177
30 % 10 66 191
Entity #3 | Chains: G
ATP SYNTHASE GAMMA CHAIN protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 39 773
95 % 8 39 1073
90 % 8 39 1095
70 % 8 41 1088
50 % 8 41 1135
40 % 8 59 594
30 % 8 59 602
Entity #4 | Chains: H
ATP SYNTHASE DELTA CHAIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 15 3039
95 % 5 15 3752
90 % 5 15 3783
70 % 5 15 3726
50 % 5 15 3622
40 % 5 15 3479
30 % 5 26 1299
Entity #5 | Chains: I
ATP SYNTHASE EPSILON CHAIN protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 19 2277
95 % 5 19 2867
90 % 5 19 2909
70 % 5 19 2903
50 % 5 19 2850
40 % 5 19 2787
30 % 5 19 2608

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.