Sequence Similarity Clusters for the Entities in PDB 1E79

Entity #1 | Chains: A,B,C
ATP SYNTHASE ALPHA CHAIN HEART ISOFORM protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 29 300
95 % 8 41 277
90 % 8 41 289
70 % 9 59 166
50 % 10 71 167
40 % 10 71 182
30 % 10 71 199
Entity #2 | Chains: D,E,F
ATP SYNTHASE BETA CHAIN protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 40 205
95 % 8 42 278
90 % 8 42 290
70 % 10 72 138
50 % 10 72 168
40 % 10 72 183
30 % 10 72 200
Entity #3 | Chains: G
ATP SYNTHASE GAMMA CHAIN protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 39 878
95 % 8 39 1186
90 % 8 39 1213
70 % 8 41 1183
50 % 8 41 1242
40 % 8 65 627
30 % 8 65 619
Entity #4 | Chains: H
ATP SYNTHASE DELTA CHAIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 15 3382
95 % 5 15 4150
90 % 5 15 4178
70 % 5 15 4103
50 % 5 15 3962
40 % 5 15 3790
30 % 5 29 1297
Entity #5 | Chains: I
ATP SYNTHASE EPSILON CHAIN protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 19 2547
95 % 5 19 3173
90 % 5 19 3217
70 % 5 19 3187
50 % 5 19 3110
40 % 5 19 3035
30 % 5 19 2845

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.