Sequence Similarity Clusters for the Entities in PDB 1E79

Entity #1 | Chains: A,B,C
ATP SYNTHASE ALPHA CHAIN HEART ISOFORM protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 29 241
95 % 8 41 204
90 % 8 41 217
70 % 9 55 147
50 % 10 62 160
40 % 10 62 174
30 % 10 62 190
Entity #2 | Chains: D,E,F
ATP SYNTHASE BETA CHAIN protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 40 155
95 % 8 42 205
90 % 8 42 218
70 % 10 63 133
50 % 10 63 161
40 % 10 63 175
30 % 10 63 191
Entity #3 | Chains: G
ATP SYNTHASE GAMMA CHAIN protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 39 726
95 % 8 39 1000
90 % 8 39 1024
70 % 8 41 1015
50 % 8 41 1065
40 % 8 56 593
30 % 8 56 591
Entity #4 | Chains: H
ATP SYNTHASE DELTA CHAIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 15 2827
95 % 5 15 3533
90 % 5 15 3567
70 % 5 15 3526
50 % 5 15 3409
40 % 5 15 3286
30 % 5 26 1229
Entity #5 | Chains: I
ATP SYNTHASE EPSILON CHAIN protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 19 2100
95 % 5 19 2675
90 % 5 19 2719
70 % 5 19 2723
50 % 5 19 2671
40 % 5 19 2622
30 % 5 19 2450

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.