Sequence Similarity Clusters for the Entities in PDB 1E6Y

Entity #1 | Chains: A,D
METHYL-COENZYME M REDUCTASE SUBUNIT ALPHA protein, length: 569 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 28675
95 % 1 1 23481
90 % 1 1 22732
70 % 1 1 20804
50 % 12 20 1144
40 % 12 20 1164
30 % 12 20 1146
Entity #2 | Chains: B,E
METHYL-COENZYME M REDUCTASE I BETA SUBUNIT protein, length: 433 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 30002
95 % 1 1 24239
90 % 1 1 23466
70 % 1 1 21429
50 % 12 20 1147
40 % 12 20 1166
30 % 12 20 1149
Entity #3 | Chains: C,F
METHYL-COENZYME M REDUCTASE SUBUNIT GAMMA protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 35510
95 % 1 1 27409
90 % 1 1 26484
70 % 1 1 24017
50 % 12 19 1240
40 % 12 19 1254
30 % 12 19 1229

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.