Sequence Similarity Clusters for the Entities in PDB 1E6V

Entity #1 | Chains: A,D
METHYL-COENZYME M REDUCTASE I ALPHA SUBUNIT protein, length: 553 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 31072
95 % 1 1 25416
90 % 1 1 24581
70 % 21 21 1176
50 % 23 23 1107
40 % 23 23 1117
30 % 23 23 1102
Entity #2 | Chains: B,E
METHYL-COENZYME M REDUCTASE I BETA SUBUNIT protein, length: 443 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 32269
95 % 1 1 26089
90 % 1 1 25226
70 % 16 16 1734
50 % 23 23 1110
40 % 23 23 1121
30 % 23 23 1108
Entity #3 | Chains: C,F
METHYL-COENZYME M REDUCTASE I GAMMA SUBUNIT protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37676
95 % 1 1 29200
90 % 1 1 28186
70 % 1 1 25468
50 % 22 22 1194
40 % 22 22 1207
30 % 22 22 1185

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.