Sequence Similarity Clusters for the Entities in PDB 1E6O

Entity #1 | Chains: H
IMMUNOGLOBULIN HEAVY CHAIN protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40537
95 % 1 2 31029 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.3
PDBFlex
90 % 3 29 877
70 % 377 2311 2
50 % 773 4781 1
40 % 773 4781 1
30 % 838 5635 1
Entity #2 | Chains: L
IMMUNOGLOBULIN LIGHT CHAIN protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41299
95 % 1 6 12503 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 11 146 143
70 % 378 2362 1
50 % 774 4781 1
40 % 774 4781 1
30 % 839 5635 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures