Sequence Similarity Clusters for the Entities in PDB 1E6O

Entity #1 | Chains: H
IMMUNOGLOBULIN HEAVY CHAIN protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 37929
95 % 1 2 32166 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.3
PDBFlex
90 % 3 39 733
70 % 416 2478 2
50 % 850 5107 1
40 % 1035 5756 1
30 % 1265 7175 1
Entity #2 | Chains: L
IMMUNOGLOBULIN LIGHT CHAIN protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 17678
95 % 1 6 12489 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 11 148 145
70 % 416 2519 1
50 % 851 5107 1
40 % 1036 5756 1
30 % 1266 7175 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures