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Crystal structure of HIV-1 capsid protein (p24) in complex with Fab13B5
Sequence Clustering and Redundancy Reduction Results
1E6J
Sequence Clusters for the Sequence Entities in PDB 1E6J
Entity #1: Chains: H - IMMUNOGLOBULIN protein, length: 219 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 32339
95% 2 2 24882
90% 18 29 730
70% 1262 1646 2
50% 2611 3403 1
40% 2612 3404 1
30% 3057 4021 1
Entity #2: Chains: L - IMMUNOGLOBULIN protein, length: 210 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 32947
95% 6 6 9915
90% 70 132 124
70% 1102 1426 3
50% 2612 3403 1
40% 2613 3404 1
30% 3058 4021 1
Entity #3: Chains: P - CAPSID PROTEIN P24 protein, length: 210 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 22014
95% 18 31 1
90% 18 32 1
70% 18 32 1
50% 18 32 2
40% 18 32 2
30% 20 34 3
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.