Sequence Similarity Clusters for the Entities in PDB 1E6J

Entity #1 | Chains: H
IMMUNOGLOBULIN protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 37291
95 % 2 2 28533
90 % 17 25 1058
70 % 1524 2036 1
50 % 3156 4210 1
40 % 3156 4211 1
30 % 3708 4962 1
Entity #2 | Chains: L
IMMUNOGLOBULIN protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 37989
95 % 6 6 11456
90 % 77 140 139
70 % 1311 1726 2
50 % 3157 4210 1
40 % 3157 4211 1
30 % 3709 4962 1
Entity #3 | Chains: P
CAPSID PROTEIN P24 protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 14108
95 % 23 42 1
90 % 23 43 1
70 % 23 43 3
50 % 23 43 2
40 % 23 43 2
30 % 25 45 4

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.