Sequence Similarity Clusters for the Entities in PDB 1E6J

Entity #1 | Chains: H
IMMUNOGLOBULIN protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 35718
95 % 2 2 27349
90 % 17 25 1008
70 % 1438 1912 1
50 % 2967 3940 1
40 % 2968 3941 1
30 % 3504 4669 1
Entity #2 | Chains: L
IMMUNOGLOBULIN protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 36380
95 % 6 6 10997
90 % 74 137 137
70 % 1234 1620 3
50 % 2968 3940 1
40 % 2969 3941 1
30 % 3505 4669 1
Entity #3 | Chains: P
CAPSID PROTEIN P24 protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 13451
95 % 18 34 1
90 % 18 35 1
70 % 18 35 2
50 % 18 35 2
40 % 18 35 2
30 % 20 37 4

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.