Sequence Similarity Clusters for the Entities in PDB 1E6J

Entity #1 | Chains: H
IMMUNOGLOBULIN protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 36244
95 % 2 2 27745
90 % 17 25 1024
70 % 1458 1945 1
50 % 3012 4012 1
40 % 3013 4014 1
30 % 3556 4750 1
Entity #2 | Chains: L
IMMUNOGLOBULIN protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 36920
95 % 6 6 11153
90 % 77 140 136
70 % 1251 1648 3
50 % 3013 4012 1
40 % 3014 4014 1
30 % 3557 4750 1
Entity #3 | Chains: P
CAPSID PROTEIN P24 protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 13660
95 % 22 39 1
90 % 22 40 1
70 % 22 40 2
50 % 22 40 2
40 % 22 40 2
30 % 24 42 4

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.