Sequence Similarity Clusters for the Entities in PDB 1E6J

Entity #1 | Chains: H
IMMUNOGLOBULIN protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 35175
95 % 2 2 26963
90 % 17 25 992
70 % 1405 1866 1
50 % 2899 3846 1
40 % 2900 3847 1
30 % 3435 4574 1
Entity #2 | Chains: L
IMMUNOGLOBULIN protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 35837
95 % 6 6 10795
90 % 73 136 134
70 % 1207 1583 3
50 % 2900 3846 1
40 % 2901 3847 1
30 % 3436 4574 1
Entity #3 | Chains: P
CAPSID PROTEIN P24 protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 13209
95 % 18 32 1
90 % 18 33 1
70 % 18 33 2
50 % 18 33 2
40 % 18 33 2
30 % 20 35 4

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.