Sequence Similarity Clusters for the Entities in PDB 1E6J

Entity #1 | Chains: H
IMMUNOGLOBULIN protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 34177
95 % 2 2 26220
90 % 19 31 723
70 % 1361 1790 1
50 % 2809 3692 1
40 % 2810 3693 1
30 % 3289 4355 1
Entity #2 | Chains: L
IMMUNOGLOBULIN protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 34821
95 % 6 6 10447
90 % 72 134 130
70 % 1170 1526 3
50 % 2810 3692 1
40 % 2811 3693 1
30 % 3290 4355 1
Entity #3 | Chains: P
CAPSID PROTEIN P24 protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 23267
95 % 18 31 1
90 % 18 32 1
70 % 18 32 2
50 % 18 32 2
40 % 18 32 2
30 % 20 34 4

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.