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Crystal structure of HIV-1 capsid protein (p24) in complex with Fab13B5
Sequence Clustering and Redundancy Reduction Results
1E6J
Sequence Clusters for the Sequence Entities in PDB 1E6J
Entity #1: Chains: H - IMMUNOGLOBULIN protein, length: 219 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 31850
95% 2 2 24527
90% 18 29 712
70% 1218 1590 2
50% 2527 3295 1
40% 2528 3296 1
30% 2955 3893 1
Entity #2: Chains: L - IMMUNOGLOBULIN protein, length: 210 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 32446
95% 6 6 9756
90% 70 132 96
70% 1073 1388 3
50% 2528 3295 1
40% 2529 3296 1
30% 2956 3893 1
Entity #3: Chains: P - CAPSID PROTEIN P24 protein, length: 210 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 21667
95% 13 26 1
90% 13 27 1
70% 13 27 1
50% 13 27 2
40% 13 27 2
30% 15 29 3
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.