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Crystal structure of HIV-1 capsid protein (p24) in complex with Fab13B5
Sequence Clustering and Redundancy Reduction Results
1E6J
Sequence Clusters for the Sequence Entities in PDB 1E6J
Entity #1: Chains: H - IMMUNOGLOBULIN protein, length: 219 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 29715
95% 2 2 22952
90% 17 28 701
70% 1135 1461 2
50% 2355 3031 1
40% 2356 3032 1
30% 2760 3590 1
Entity #2: Chains: L - IMMUNOGLOBULIN protein, length: 210 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 30267
95% 6 6 9178
90% 62 113 92
70% 998 1274 3
50% 2356 3031 1
40% 2357 3032 1
30% 2761 3590 1
Entity #3: Chains: P - CAPSID PROTEIN P24 protein, length: 210 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 20265
95% 6 62 1
90% 6 63 1
70% 6 63 1
50% 6 63 2
40% 6 63 2
30% 8 65 3
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.