Sequence Similarity Clusters for the Entities in PDB 1E6J

Entity #1 | Chains: H
IMMUNOGLOBULIN protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 39704
95 % 2 2 30381
90 % 17 25 1129
70 % 1639 2232 2
50 % 3390 4607 1
40 % 3390 4607 1
30 % 3995 5422 1
Entity #2 | Chains: L
IMMUNOGLOBULIN protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 40443
95 % 6 6 12233
90 % 78 145 141
70 % 1670 2274 1
50 % 3391 4607 1
40 % 3391 4607 1
30 % 3996 5422 1
Entity #3 | Chains: P
CAPSID PROTEIN P24 protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 15041
95 % 23 43 1
90 % 23 44 1
70 % 23 44 3
50 % 23 44 2
40 % 23 44 2
30 % 25 46 5

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.