Sequence Similarity Clusters for the Entities in PDB 1E6D

Entity #1 | Chains: H
PHOTOSYNTHETIC REACTION CENTER H SUBUNIT protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 96 241
95 % 10 97 335
90 % 10 97 361
70 % 10 97 399
50 % 10 97 467
40 % 17 126 353
30 % 17 126 362
Entity #2 | Chains: L
PHOTOSYNTHETIC REACTION CENTER L SUBUNIT protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 68 404
95 % 10 97 334
90 % 10 97 360
70 % 10 97 398
50 % 17 126 327
40 % 17 126 352
30 % 17 126 361
Entity #3 | Chains: M
PHOTOSYNTHETIC REACTION CENTER M SUBUNIT protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53453
95 % 10 97 333
90 % 10 97 359
70 % 10 97 396
50 % 17 126 326
40 % 17 126 350
30 % 17 126 359

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.