Sequence Similarity Clusters for the Entities in PDB 1E6D

Entity #1 | Chains: H
PHOTOSYNTHETIC REACTION CENTER H SUBUNIT protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 95 243
95 % 10 96 335
90 % 10 96 362
70 % 10 96 400
50 % 10 96 467
40 % 17 125 352
30 % 17 125 360
Entity #2 | Chains: L
PHOTOSYNTHETIC REACTION CENTER L SUBUNIT protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 68 403
95 % 10 96 333
90 % 10 96 361
70 % 10 96 399
50 % 17 125 329
40 % 17 125 351
30 % 17 125 359
Entity #3 | Chains: M
PHOTOSYNTHETIC REACTION CENTER M SUBUNIT protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52892
95 % 10 96 332
90 % 10 96 359
70 % 10 96 397
50 % 17 125 328
40 % 17 125 350
30 % 17 125 358

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.