Sequence Similarity Clusters for the Entities in PDB 1E5D

Entity #1 | Chains: A,B
RUBREDOXIN\:OXYGEN OXIDOREDUCTASE protein, length: 402 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 33727
95 % 1 1 27067 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 26139
70 % 1 1 23686
50 % 1 1 20404
40 % 4 7 1951
30 % 5 8 1762

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures