Sequence Similarity Clusters for the Entities in PDB 1E54

Entity #1 | Chains: A
OUTER MEMBRANE PORIN PROTEIN 32 protein, length: 332 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 29275
95 % 3 3 25566 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 3 3 24680
70 % 3 3 22381
50 % 3 3 19219
40 % 3 3 16971
30 % 3 3 14224
Entity #2 | Chains: B
OMP32 protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures