Sequence Similarity Clusters for the Entities in PDB 1E50

Entity #1 | Chains: A,C,E,G,Q,R
CORE-BINDING FACTOR ALPHA SUBUNIT protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 8 2869
95 % 9 13 2219
90 % 9 13 2286
70 % 9 13 2283
50 % 9 13 2262
40 % 9 13 2260
30 % 9 13 2157
Entity #2 | Chains: B,D,F,H
CORE-BINDING FACTOR CBF-BETA protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 12899
95 % 9 13 2438
90 % 9 13 2490
70 % 9 13 2480
50 % 9 13 2439
40 % 9 13 2413
30 % 9 13 2282

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.