Sequence Similarity Clusters for the Entities in PDB 1E50

Entity #1 | Chains: A,C,E,G,Q,R
CORE-BINDING FACTOR ALPHA SUBUNIT protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 8 2991
95 % 9 13 2316
90 % 9 13 2380
70 % 9 13 2372
50 % 9 13 2363
40 % 9 13 2340
30 % 9 13 2243
Entity #2 | Chains: B,D,F,H
CORE-BINDING FACTOR CBF-BETA protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 13437
95 % 9 13 2538
90 % 9 13 2588
70 % 9 13 2577
50 % 9 13 2543
40 % 9 13 2494
30 % 9 13 2370

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.