Sequence Similarity Clusters for the Entities in PDB 1E50

Entity #1 | Chains: A,C,E,G,Q,R
CORE-BINDING FACTOR ALPHA SUBUNIT protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 8 2915
95 % 9 13 2253 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.2
PDBFlex
90 % 9 13 2322
70 % 9 13 2311
50 % 9 13 2296
40 % 9 13 2286
30 % 9 13 2190
Entity #2 | Chains: B,D,F,H
CORE-BINDING FACTOR CBF-BETA protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 13118
95 % 9 13 2474 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.7
PDBFlex
90 % 9 13 2527
70 % 9 13 2511
50 % 9 13 2474
40 % 9 13 2439
30 % 9 13 2313

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.