Sequence Similarity Clusters for the Entities in PDB 1E50

Entity #1 | Chains: A,C,E,G,Q,R
CORE-BINDING FACTOR ALPHA SUBUNIT protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 8 3053
95 % 9 13 2349 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.1
PDBFlex
90 % 9 13 2412
70 % 9 13 2402
50 % 9 13 2389
40 % 9 13 2370
30 % 9 13 2268
Entity #2 | Chains: B,D,F,H
CORE-BINDING FACTOR CBF-BETA protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 13670
95 % 9 13 2577 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.7
PDBFlex
90 % 9 13 2627
70 % 9 13 2615
50 % 9 13 2580
40 % 9 13 2532
30 % 9 13 2404

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.