Sequence Similarity Clusters for the Entities in PDB 1E4X

Entity #1 | Chains: H
TAB2 protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40156
95 % 2 3 22680 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.0
PDBFlex
90 % 3 4 14228
70 % 695 2511 2
50 % 1443 5180 1
40 % 1690 5834 1
30 % 2066 7269 1
Entity #2 | Chains: I
TAB2 protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40156
95 % 3 3 22680 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.0
PDBFlex
90 % 4 4 14228
70 % 696 2511 2
50 % 1444 5180 1
40 % 1691 5834 1
30 % 2067 7269 1
Entity #3 | Chains: L,M
TAB2 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 28347
95 % 2 2 24816 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 17 68 401
70 % 702 2553 1
50 % 1445 5180 1
40 % 1692 5834 1
30 % 2068 7269 1
Entity #4 | Chains: P,Q
CYCLIC PEPTIDE protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures