Sequence Similarity Clusters for the Entities in PDB 1E4X

Entity #1 | Chains: H
TAB2 protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40712
95 % 2 3 23166 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.0
PDBFlex
90 % 2 3 22435
70 % 632 2299 2
50 % 1312 4752 1
40 % 1312 4752 1
30 % 1463 5606 1
Entity #2 | Chains: I
TAB2 protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60552
95 % 3 3 23166 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.0
PDBFlex
90 % 3 3 22435
70 % 633 2299 2
50 % 1313 4752 1
40 % 1313 4752 1
30 % 1464 5606 1
Entity #3 | Chains: L,M
TAB2 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 27868
95 % 2 2 23227 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 17 68 373
70 % 640 2346 1
50 % 1314 4752 1
40 % 1314 4752 1
30 % 1465 5606 1
Entity #4 | Chains: P,Q
CYCLIC PEPTIDE protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.