Sequence Similarity Clusters for the Entities in PDB 1E4X

Entity #1 | Chains: H
TAB2 protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 41960
95 % 2 3 23878 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.0
PDBFlex
90 % 2 3 23101
70 % 680 2424 2
50 % 1410 5011 1
40 % 1410 5011 1
30 % 1605 5941 1
Entity #2 | Chains: I
TAB2 protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62270
95 % 3 3 23878 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.0
PDBFlex
90 % 3 3 23101
70 % 681 2424 2
50 % 1411 5011 1
40 % 1411 5011 1
30 % 1606 5941 1
Entity #3 | Chains: L,M
TAB2 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 28774
95 % 2 2 23940 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 17 68 398
70 % 688 2474 1
50 % 1412 5011 1
40 % 1412 5011 1
30 % 1607 5941 1
Entity #4 | Chains: P,Q
CYCLIC PEPTIDE protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures