Sequence Similarity Clusters for the Entities in PDB 1E4X

Entity #1 | Chains: H
TAB2 protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 41456
95 % 2 3 23582 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.0
PDBFlex
90 % 2 3 22820
70 % 662 2376 2
50 % 1373 4913 1
40 % 1373 4913 1
30 % 1530 5780 1
Entity #2 | Chains: I
TAB2 protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61555
95 % 3 3 23582 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.0
PDBFlex
90 % 3 3 22820
70 % 663 2376 2
50 % 1374 4913 1
40 % 1374 4913 1
30 % 1531 5780 1
Entity #3 | Chains: L,M
TAB2 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 28414
95 % 2 2 23644 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 17 68 382
70 % 670 2426 1
50 % 1375 4913 1
40 % 1375 4913 1
30 % 1532 5780 1
Entity #4 | Chains: P,Q
CYCLIC PEPTIDE protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures