Sequence Similarity Clusters for the Entities in PDB 1E4X

Entity #1 | Chains: H
TAB2 protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40269
95 % 2 3 22938 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.0
PDBFlex
90 % 2 3 22221
70 % 614 2244 2
50 % 1274 4633 1
40 % 1274 4633 1
30 % 1421 5461 1
Entity #2 | Chains: I
TAB2 protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59867
95 % 3 3 22938 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.0
PDBFlex
90 % 3 3 22221
70 % 615 2244 2
50 % 1275 4633 1
40 % 1275 4633 1
30 % 1422 5461 1
Entity #3 | Chains: L,M
TAB2 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 27583
95 % 2 2 22998 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 17 67 370
70 % 621 2287 1
50 % 1276 4633 1
40 % 1276 4633 1
30 % 1423 5461 1
Entity #4 | Chains: P,Q
CYCLIC PEPTIDE protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.