Sequence Similarity Clusters for the Entities in PDB 1E4W

Entity #1 | Chains: H
TAB2 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40535
95 % 1 3 23077 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.0
PDBFlex
90 % 1 3 22351
70 % 493 2280 2
50 % 1018 4713 1
40 % 1018 4713 1
30 % 1121 5567 1
Entity #2 | Chains: L
TAB2 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 27769
95 % 1 2 23137 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 16 67 373
70 % 494 2327 1
50 % 1019 4713 1
40 % 1019 4713 1
30 % 1122 5567 1
Entity #3 | Chains: P
CYCLIC PEPTIDE protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.