Sequence Similarity Clusters for the Entities in PDB 1E4W

Entity #1 | Chains: H
TAB2 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 42013
95 % 1 3 23909 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.0
PDBFlex
90 % 1 3 23131
70 % 541 2429 2
50 % 1117 5021 1
40 % 1117 5021 1
30 % 1261 5951 1
Entity #2 | Chains: L
TAB2 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28815
95 % 1 2 23971 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 16 68 400
70 % 542 2479 1
50 % 1118 5021 1
40 % 1118 5021 1
30 % 1262 5951 1
Entity #3 | Chains: P
CYCLIC PEPTIDE protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures