Sequence Similarity Clusters for the Entities in PDB 1E4W

Entity #1 | Chains: H
TAB2 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48798
95 % 1 3 22641 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.0
PDBFlex
90 % 1 4 14199
70 % 550 2497 2
50 % 1135 5152 1
40 % 1348 5806 1
30 % 1650 7240 1
Entity #2 | Chains: L
TAB2 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28293
95 % 1 2 24776 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 16 68 401
70 % 550 2538 1
50 % 1136 5152 1
40 % 1349 5806 1
30 % 1651 7240 1
Entity #3 | Chains: P
CYCLIC PEPTIDE protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures