Sequence Similarity Clusters for the Entities in PDB 1E4W

Entity #1 | Chains: H
TAB2 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41456
95 % 1 3 23582 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.0
PDBFlex
90 % 1 3 22820
70 % 521 2376 2
50 % 1076 4913 1
40 % 1076 4913 1
30 % 1184 5780 1
Entity #2 | Chains: L
TAB2 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28414
95 % 1 2 23644 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 16 68 382
70 % 522 2426 1
50 % 1077 4913 1
40 % 1077 4913 1
30 % 1185 5780 1
Entity #3 | Chains: P
CYCLIC PEPTIDE protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures