Sequence Similarity Clusters for the Entities in PDB 1E4K

Entity #1 | Chains: A,B
FC FRAGMENT OF HUMAN IGG1 protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 14 1241
95 % 146 160 92 Flexibility: Low
Max RMSD: 5.2, Avg RMSD: 1.4
PDBFlex
90 % 154 169 88
70 % 155 170 104
50 % 164 179 138
40 % 164 179 151
30 % 5088 5571 1
Entity #2 | Chains: C
LOW AFFINITY IMMUNOGLOBULIN GAMMA FC RECEPTOR III protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 15551
95 % 8 9 7885 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 11 12 5164
70 % 12 13 4693
50 % 19 22 2669
40 % 24 30 1328
30 % 24 30 1305

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.