Sequence Similarity Clusters for the Entities in PDB 1E4K

Entity #1 | Chains: A,B
FC FRAGMENT OF HUMAN IGG1 protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 14 1291
95 % 149 164 114 Flexibility: Low
Max RMSD: 5.2, Avg RMSD: 1.4
PDBFlex
90 % 157 173 97
70 % 158 174 108
50 % 169 185 139
40 % 169 185 151
30 % 5420 5941 1
Entity #2 | Chains: C
LOW AFFINITY IMMUNOGLOBULIN GAMMA FC RECEPTOR III protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 16181
95 % 10 11 6124 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 14 15 3959
70 % 15 16 3680
50 % 22 25 2313
40 % 27 33 1265
30 % 27 33 1243

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures