Sequence Similarity Clusters for the Entities in PDB 1E4K

Entity #1 | Chains: A,B
FC FRAGMENT OF HUMAN IGG1 protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 19 1127
95 % 152 167 111 Flexibility: Low
Max RMSD: 9.9, Avg RMSD: 1.5
PDBFlex
90 % 160 176 94
70 % 161 177 107
50 % 172 188 139
40 % 172 188 154
30 % 6483 7269 1
Entity #2 | Chains: C
LOW AFFINITY IMMUNOGLOBULIN GAMMA FC RECEPTOR III protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 21465
95 % 11 12 5436 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.4
PDBFlex
90 % 15 16 3853
70 % 16 17 3520
50 % 23 26 2277
40 % 28 34 1248
30 % 28 34 1251

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures