Sequence Similarity Clusters for the Entities in PDB 1E4E

Entity #1 | Chains: A
VANCOMYCIN/TEICOPLANIN A-TYPE RESISTANCE PROTEIN VANA protein, length: 343 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53117
95 % 1 2 26980 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 2 26079
70 % 1 2 23685
50 % 1 3 7337
40 % 2 4 5552
30 % 34 45 461
Entity #2 | Chains: B
VANCOMYCIN/TEICOPLANIN A-TYPE RESISTANCE PROTEIN VANA protein, length: 343 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53118
95 % 2 2 26980 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 2 2 26079
70 % 2 2 23685
50 % 2 3 7337
40 % 3 4 5552
30 % 35 45 461

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.