Sequence Similarity Clusters for the Entities in PDB 1E4E

Entity #1 | Chains: A
VANCOMYCIN/TEICOPLANIN A-TYPE RESISTANCE PROTEIN VANA protein, length: 343 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54606
95 % 1 2 27825 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 2 26879
70 % 1 2 24316
50 % 1 3 7572
40 % 2 4 5728
30 % 34 45 471
Entity #2 | Chains: B
VANCOMYCIN/TEICOPLANIN A-TYPE RESISTANCE PROTEIN VANA protein, length: 343 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54607
95 % 2 2 27825 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 2 2 26879
70 % 2 2 24316
50 % 2 3 7572
40 % 3 4 5728
30 % 35 45 471

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.