Sequence Similarity Clusters for the Entities in PDB 1E42

Entity #1 | Chains: A,B
AP-2 COMPLEX SUBUNIT BETA protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 25389
95 % 2 6 10117 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 2 6 9990
70 % 2 6 9501
50 % 2 6 8639
40 % 2 6 7858
30 % 2 6 6814

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures