Sequence Similarity Clusters for the Entities in PDB 1E42

Entity #1 | Chains: A,B
AP-2 COMPLEX SUBUNIT BETA protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 28069
95 % 2 6 9412 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 2 6 9319
70 % 2 6 8931
50 % 2 6 8099
40 % 2 6 7453
30 % 2 6 6577

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures