Sequence Similarity Clusters for the Entities in PDB 1E40

Entity #1 | Chains: A
ALPHA-AMYLASE protein, length: 483 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 21045
95 % 4 4 19078 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 5 5 12801
70 % 11 16 3967
50 % 13 25 2409
40 % 13 25 2380
30 % 14 29 1971

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3BH4 1 A, B Alpha-amylase 1390 3.2.1.1 | Details
2 1MXG 1 A alpha amylase 2262 3.2.1.1 | Details
3 1E43 1 A ALPHA-AMYLASE CHIMAERIC STRUCTURE CONSISTING OF RESIDUES 1 - 300 OF B. AMYLOLIQUEFACIENS AND RESIDUES 301 - 483 OF B. LICHENIFORMIS 1390 3.2.1.1 | Details
4 1OB0 1 A ALPHA-AMYLASE 1402 3.2.1.1 | Details
5 1VJS 1 A ALPHA-AMYLASE 1402 3.2.1.1 | Details
6 1E3Z 1 A ALPHA-AMYLASE CHIMAERIC STRUCTURE CONSISTING OF RESIDUES 1 - 300 OF B. AMYLOLIQUEFACIENS AND RESIDUES 301 - 483 OF B. LICHENIFORMIS IN COMPLEX WITH ACARBOSE 1390 3.2.1.1 | Details
7 1E3X 1 A ALPHA-AMYLASE CHIMAERIC STRUCTURE CONSISTING OF RESIDUES 1 - 300 OF B. AMYLOLIQUEFACIENS AND RESIDUES 301 - 483 OF B. LICHENIFORMIS 1390 3.2.1.1 | Details
8 1BLI 1 A ALPHA-AMYLASE PROTEIN PRODUCED BY NOVO NORDISK A/S, DENMARK 1402 3.2.1.1 | Details
9 2D3N 1 A Glucan 1,4-alpha-maltohexaosidase 1416 3.2.1.98 | Details
10 4UZU 1 A ALPHA-AMYLASE DELETION AT 181-182, AND EXTRA PROLINE RESIDUE AT C TERMINUS, PRO513 ALPHA AMYLASE WITH 2 RESIDUE DELETION, RESIDUES 35-549 1422 3.2.1.1 | Details
11 1WPC 1 A Glucan 1,4-alpha-maltohexaosidase 1416 3.2.1.98 | Details
12 2GJP 1 A alpha-amylase 79882 3.2.1.98 | Details
13 1HVX 1 A ALPHA-AMYLASE 1422 3.2.1.1 | Details
14 1E40 1 A ALPHA-AMYLASE CHIMAERIC STRUCTURE CONSISTING OF RESIDUES 1 - 300 OF B. AMYLOLIQUEFACIENS AND RESIDUES 301 - 483 OF B. LICHENIFORMIS IN COMPLEX WITH TRIS AND MALTOTRIOSE 1390 3.2.1.1 | Details
15 1W9X 1 A ALPHA AMYLASE ACARBOSE-DERIVED NONASACCHARIDE 79882 3.2.1.1 | Details
16 1WP6 1 A Glucan 1,4-alpha-maltohexaosidase 1416 3.2.1.98 | Details
17 1MXD 1 A alpha amylase 2262 3.2.1.1 | Details
18 3QGV 1 A Alpha amylase 2262 3.2.1.1 | Details
19 2DIE 1 A amylase residues 1-485 1409 3.2.1.1 | Details
20 6AG0 1 A, C Alpha-amylase 1422 3.2.1.1 | Details
21 2GJR 1 A alpha-amylase 79882 3.2.1.98 | Details
22 1UD2 1 A amylase residues 1-480 129736 3.2.1.1 | Details
23 1UD4 1 A amylase residues 1-480 129736 3.2.1.1 | Details
24 2D3L 1 A Glucan 1,4-alpha-maltohexaosidase 1416 3.2.1.98 | Details
25 1MWO 1 A alpha amylase 2262 3.2.1.1 | Details
26 1UD3 1 A amylase residues 1-480 129736 3.2.1.1 | Details
27 1UD6 1 A amylase residues 1-480 129736 3.2.1.1 | Details
28 1UD5 1 A amylase residues 1-480 129736 3.2.1.1 | Details
29 1UD8 1 A amylase residues 1-480 129736 3.2.1.1 | Details