Sequence Similarity Clusters for the Entities in PDB 1E40

Entity #1 | Chains: A
ALPHA-AMYLASE protein, length: 483 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 17203
95 % 4 4 15782 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 5 5 11093
70 % 11 16 3674
50 % 13 24 2334
40 % 13 24 2323
30 % 14 28 1942

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.