Sequence Similarity Clusters for the Entities in PDB 1E3W

Entity #1 | Chains: A
SHORT CHAIN 3-HYDROXYACYL-COA DEHYDROGENASE protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59583
95 % 2 4 5911 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 2 4 5932
70 % 3 7 3435
50 % 7 13 1198
40 % 8 14 1124
30 % 450 897 4
Entity #2 | Chains: B,C,D
SHORT CHAIN 3-HYDROXYACYL-COA DEHYDROGENASE protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 5912
95 % 3 4 5911 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 3 4 5932
70 % 4 7 3435
50 % 8 13 1198
40 % 9 14 1124
30 % 451 897 4

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures