Sequence Similarity Clusters for the Entities in PDB 1E3W

Entity #1 | Chains: A
SHORT CHAIN 3-HYDROXYACYL-COA DEHYDROGENASE protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57747
95 % 2 4 5710 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 2 4 5723
70 % 3 7 3301
50 % 7 13 1153
40 % 8 14 1091
30 % 434 874 4
Entity #2 | Chains: B,C,D
SHORT CHAIN 3-HYDROXYACYL-COA DEHYDROGENASE protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 5697
95 % 3 4 5710 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 3 4 5723
70 % 4 7 3301
50 % 8 13 1153
40 % 9 14 1091
30 % 435 874 4

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.