Sequence Similarity Clusters for the Entities in PDB 1E3M

Entity #1 | Chains: A,B
DNA MISMATCH REPAIR PROTEIN MUTS protein, length: 800 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 3066
95 % 3 16 1258 Flexibility: Medium
Max RMSD: 14.6, Avg RMSD: 7.5
PDBFlex
90 % 3 16 1288
70 % 3 16 1314
50 % 3 16 1355
40 % 4 19 1198
30 % 4 19 1172
Entity #2 | Chains: E
5'-D(*AP*GP*CP*TP*GP*CP*CP*AP*GP*GP*CP*AP*CP*CP*AP* GP*TP*GP*TP*CP*AP*GP*CP*GP*TP*CP*CP*TP*AP*T)-3' dna, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: F
5'-D(*AP*TP*AP*GP*GP*AP*CP*GP*CP*TP*GP*AP*CP*AP*CP* TP*GP*GP*TP*GP*CP*TP*TP*GP*GP*CP*AP*GP*CP*T)-3' dna, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1WB9 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS RESIDUES 1-800 562
2 3K0S 1 A, B DNA mismatch repair protein mutS UNP residues 2-800 562
3 1EWQ 3 A, B DNA MISMATCH REPAIR PROTEIN MUTS 271
4 1E3M 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS RESIDUES 1-800 562
5 1W7A 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS DNA OLIGOMER CONTAINING GT MISMATCH ADENOSINE TRIPHOSPHATE (ATP) RESIDUES 1-800 562
6 1OH6 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS RESIDUES 1-800 562
7 1WBD 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS RESIDUES 1-800 562
8 1WBB 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS RESIDUES 1-800 562
9 1OH7 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS RESIDUES 1-800 562
10 1NG9 3 A, B DNA mismatch repair protein MutS residues 1-800 562
11 1FW6 3 A, B DNA MISMATCH REPAIR PROTEIN MUTS RESIDUES 1-768 271
12 1OH8 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS RESIDUES 1-800 562
13 1OH5 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS RESIDUES 1-800 562
14 1NNE 3 A, B DNA Mismatch Repair protein MutS 271
15 3ZLJ 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS 562
16 2WTU 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS RESIDUES 1-800 562
17 5AKB 1 A, B, E DNA MISMATCH REPAIR PROTEIN MUTS BM(PEO)3 (THIOETHER) CROSSLINK BETWEEN-A 246 AND D 131, B 246 AND C 131, E 246 AND F 131 562
18 5AKC 1 A, B, E, F, I, J DNA MISMATCH REPAIR PROTEIN MUTS BM(PEO)3 (THIOETHER) CROSSLINK BETWEEN A 246 AND D 131, B 246 AND C 131, E 246 AND H 131, F 246 AND G 131, I 246 AND L 131, J 246 AND K 131 562
19 5AKD 1 A, B, E, F, I, J DNA MISMATCH REPAIR PROTEIN MUTS BM(PEO)3 (THIOETHER) CROSSLINK BETWEEN A 246 AND D 131, B 246 AND C 131, E 246 AND H 131, F 246 AND G 131, I 246 AND L 131, J 246 AND K 131 562