Sequence Similarity Clusters for the Entities in PDB 1E3M

Entity #1 | Chains: A,B
DNA MISMATCH REPAIR PROTEIN MUTS protein, length: 800 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 12 2234
95 % 3 16 1379 Flexibility: Medium
Max RMSD: 16.6, Avg RMSD: 7.7
PDBFlex
90 % 3 16 1409
70 % 3 16 1425
50 % 3 18 1336
40 % 4 21 1184
30 % 4 25 1105
Entity #2 | Chains: E
5'-D(*AP*GP*CP*TP*GP*CP*CP*AP*GP*GP*CP*AP*CP*CP*AP* GP*TP*GP*TP*CP*AP*GP*CP*GP*TP*CP*CP*TP*AP*T)-3' dna, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: F
5'-D(*AP*TP*AP*GP*GP*AP*CP*GP*CP*TP*GP*AP*CP*AP*CP* TP*GP*GP*TP*GP*CP*TP*TP*GP*GP*CP*AP*GP*CP*T)-3' dna, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1WB9 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS RESIDUES 1-800 562
2 3K0S 1 A, B DNA mismatch repair protein mutS UNP residues 2-800 562
3 1EWQ 3 A, B DNA MISMATCH REPAIR PROTEIN MUTS 271
4 1E3M 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS RESIDUES 1-800 562
5 1W7A 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS DNA OLIGOMER CONTAINING GT MISMATCH ADENOSINE TRIPHOSPHATE (ATP) RESIDUES 1-800 562
6 1OH6 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS RESIDUES 1-800 562
7 1WBD 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS RESIDUES 1-800 562
8 1WBB 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS RESIDUES 1-800 562
9 1OH7 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS RESIDUES 1-800 562
10 1NG9 3 A, B DNA mismatch repair protein MutS residues 1-800 562
11 3THX 2 B DNA mismatch repair protein Msh3 UNP residues 219-1137 9606
12 1FW6 3 A, B DNA MISMATCH REPAIR PROTEIN MUTS RESIDUES 1-768 271
13 3THY 2 B DNA mismatch repair protein Msh3 UNP residues 219- 1134 9606
14 1OH8 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS RESIDUES 1-800 562
15 1OH5 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS RESIDUES 1-800 562
16 1NNE 3 A, B DNA Mismatch Repair protein MutS 271
17 3THW 2 B DNA mismatch repair protein Msh3 UNP residues 219- 1134 9606
18 3ZLJ 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS 562
19 5YK4 1 A, B DNA mismatch repair protein MutS UNP RESIDUES 1-814 485
20 2WTU 1 A, B DNA MISMATCH REPAIR PROTEIN MUTS RESIDUES 1-800 562
21 5X9W 1 A, B DNA mismatch repair protein MutS UNP residues 1-814 485
22 3THZ 2 B DNA mismatch repair protein Msh3 UNP residues 219- 1134 9606
23 5AKB 1 A, B, E DNA MISMATCH REPAIR PROTEIN MUTS BM(PEO)3 (THIOETHER) CROSSLINK BETWEEN-A 246 AND D 131, B 246 AND C 131, E 246 AND F 131 562
24 5AKC 1 A, B, E, F, I, J DNA MISMATCH REPAIR PROTEIN MUTS BM(PEO)3 (THIOETHER) CROSSLINK BETWEEN A 246 AND D 131, B 246 AND C 131, E 246 AND H 131, F 246 AND G 131, I 246 AND L 131, J 246 AND K 131 562
25 5AKD 1 A, B, E, F, I, J DNA MISMATCH REPAIR PROTEIN MUTS BM(PEO)3 (THIOETHER) CROSSLINK BETWEEN A 246 AND D 131, B 246 AND C 131, E 246 AND H 131, F 246 AND G 131, I 246 AND L 131, J 246 AND K 131 562