Sequence Similarity Clusters for the Entities in PDB 1E3F

Entity #1 | Chains: A,B
TRANSTHYRETIN protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 160 224 23
95 % 216 297 9 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 0.8
PDBFlex
90 % 216 297 11
70 % 217 303 15
50 % 226 314 19
40 % 226 314 33
30 % 231 326 45

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures