Sequence Similarity Clusters for the Entities in PDB 1E3A

Entity #1 | Chains: A
PENICILLIN AMIDASE ALPHA SUBUNIT protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 27426
95 % 3 3 22928 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.1
PDBFlex
90 % 3 3 22250
70 % 3 3 20403
50 % 3 3 17683
40 % 3 3 15766
30 % 3 3 13491
Entity #2 | Chains: B
PENICILLIN AMIDASE BETA SUBUNIT protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 10198
95 % 4 24 2438 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 4 24 2504
70 % 4 26 1777
50 % 4 27 1763
40 % 4 29 1662
30 % 4 29 1632

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures