Sequence Similarity Clusters for the Entities in PDB 1E3A

Entity #1 | Chains: A
PENICILLIN AMIDASE ALPHA SUBUNIT protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 29047
95 % 3 3 25387 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.1
PDBFlex
90 % 3 3 24516
70 % 3 3 22222
50 % 3 3 19080
40 % 3 3 16858
30 % 3 3 14128
Entity #2 | Chains: B
PENICILLIN AMIDASE BETA SUBUNIT protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62706
95 % 4 24 2606 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 4 24 2674
70 % 4 26 1886
50 % 4 27 1847
40 % 4 29 1719
30 % 4 29 1690

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures