Sequence Similarity Clusters for the Entities in PDB 1E27

Entity #1 | Chains: A
HLA CLASS I HISTOCOMPATIBILITY ANTIGEN HEAVY CHAIN protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 25507
95 % 99 129 219
90 % 144 189 144
70 % 358 666 7
50 % 359 671 7
40 % 381 721 10
30 % 406 838 15
Entity #2 | Chains: B
BETA-2 MICROGLOBULIN LIGHT CHAIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 328 579 2
95 % 356 622 3
90 % 359 631 4
70 % 430 859 5
50 % 438 881 5
40 % 438 881 9
30 % 438 881 14
Entity #3 | Chains: C
HIV-1 PEPTIDE (LPPVVAKEI) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.