Sequence Similarity Clusters for the Entities in PDB 1E1R

Entity #1 | Chains: A,B,C
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 29 307
95 % 9 41 285 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.1
PDBFlex
90 % 9 41 298
70 % 10 59 170
50 % 11 71 172
40 % 11 71 186
30 % 11 71 201
Entity #2 | Chains: D,E,F
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 40 210
95 % 9 42 286 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.1
PDBFlex
90 % 9 42 299
70 % 11 72 143
50 % 11 72 173
40 % 11 72 187
30 % 11 72 202
Entity #3 | Chains: G
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 39 902
95 % 9 39 1207 Flexibility: Medium
Max RMSD: 8.0, Avg RMSD: 3.2
PDBFlex
90 % 9 39 1235
70 % 9 41 1206
50 % 9 41 1264
40 % 9 65 637
30 % 9 65 625

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.