Sequence Similarity Clusters for the Entities in PDB 1E1Q

Entity #1 | Chains: A,B,C
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 29 299
95 % 11 41 276
90 % 11 41 288
70 % 14 59 166
50 % 16 71 166
40 % 16 71 182
30 % 16 71 199
Entity #2 | Chains: D,E,F
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 40 204
95 % 11 42 277
90 % 11 42 289
70 % 16 72 138
50 % 16 72 167
40 % 16 72 183
30 % 16 72 200
Entity #3 | Chains: G
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 39 876
95 % 11 39 1183
90 % 11 39 1210
70 % 11 41 1180
50 % 11 41 1240
40 % 14 65 626
30 % 14 65 618

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.