Sequence Similarity Clusters for the Entities in PDB 1E1Q

Entity #1 | Chains: A,B,C
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 29 245
95 % 11 41 219
90 % 11 41 231
70 % 14 55 155
50 % 15 62 166
40 % 15 62 181
30 % 15 62 194
Entity #2 | Chains: D,E,F
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 40 161
95 % 11 42 220
90 % 11 42 232
70 % 15 63 138
50 % 15 63 167
40 % 15 63 182
30 % 15 63 195
Entity #3 | Chains: G
BOVINE MITOCHONDRIAL F1-ATPASE protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 39 751
95 % 11 39 1034
90 % 11 39 1057
70 % 11 41 1049
50 % 11 41 1095
40 % 13 56 622
30 % 13 56 623

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.