Sequence Similarity Clusters for the Entities in PDB 1E1O

Entity #1 | Chains: A
LYSYL-TRNA SYNTHETASE, HEAT INDUCIBLE protein, length: 504 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 11322
95 % 1 5 10934 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 1 5 10775
70 % 1 7 7787
50 % 3 11 2757
40 % 9 26 680
30 % 9 26 682

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures