Sequence Similarity Clusters for the Entities in PDB 1E1H

Entity #1 | Chains: A,C
BOTULINUM NEUROTOXIN TYPE A LIGHT CHAIN protein, length: 287 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35925
95 % 1 1 28087 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 27125
70 % 1 1 24580
50 % 1 1 21119
40 % 1 1 18634
30 % 1 1 15835
Entity #2 | Chains: B,D
BOTULINUM NEUROTOXIN TYPE A LIGHT CHAIN protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41607
95 % 1 1 31516 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 22086
70 % 1 2 20223
50 % 1 2 17541
40 % 1 2 15640
30 % 1 2 13371

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.