Sequence Similarity Clusters for the Entities in PDB 1E1H

Entity #1 | Chains: A,C
BOTULINUM NEUROTOXIN TYPE A LIGHT CHAIN protein, length: 287 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38326
95 % 1 1 29903 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 28841
70 % 1 1 26003
50 % 1 1 22256
40 % 1 1 19625
30 % 1 1 16673
Entity #2 | Chains: B,D
BOTULINUM NEUROTOXIN TYPE A LIGHT CHAIN protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44319
95 % 1 1 33485 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 23539
70 % 1 2 21438
50 % 1 2 18524
40 % 1 2 16499
30 % 1 2 14104

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures