Sequence Similarity Clusters for the Entities in PDB 1E1H

Entity #1 | Chains: A,C
BOTULINUM NEUROTOXIN TYPE A LIGHT CHAIN protein, length: 287 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38790
95 % 1 1 32837 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 31435
70 % 1 1 28109
50 % 1 1 24036
40 % 1 1 21161
30 % 1 1 17648
Entity #2 | Chains: B,D
BOTULINUM NEUROTOXIN TYPE A LIGHT CHAIN protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38789
95 % 1 1 32836 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 23659
70 % 1 2 21530
50 % 1 2 18511
40 % 1 2 16347
30 % 1 2 13698

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures