Sequence Similarity Clusters for the Entities in PDB 1E1H

Entity #1 | Chains: A,C
BOTULINUM NEUROTOXIN TYPE A LIGHT CHAIN protein, length: 287 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37583
95 % 1 1 29357 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 28330
70 % 1 1 25562
50 % 1 1 21908
40 % 1 1 19326
30 % 1 1 16427
Entity #2 | Chains: B,D
BOTULINUM NEUROTOXIN TYPE A LIGHT CHAIN protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43471
95 % 1 1 32894 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 23111
70 % 1 2 21068
50 % 1 2 18229
40 % 1 2 16245
30 % 1 2 13892

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures