Sequence Similarity Clusters for the Entities in PDB 1E1C

Entity #1 | Chains: A,C
METHYLMALONYL-COA MUTASE ALPHA CHAIN protein, length: 727 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31457
95 % 6 8 4391 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.1
PDBFlex
90 % 6 8 4419
70 % 6 8 4339
50 % 9 11 3041
40 % 9 11 2990
30 % 9 11 2802
Entity #2 | Chains: B,D
METHYLMALONYL-COA MUTASE BETA CHAIN protein, length: 637 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 8 3605
95 % 6 8 4395 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 6 8 4424
70 % 6 8 4344
50 % 6 8 4168
40 % 6 8 3990
30 % 6 8 3696

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures