Sequence Similarity Clusters for the Entities in PDB 1E1C

Entity #1 | Chains: A,C
METHYLMALONYL-COA MUTASE ALPHA CHAIN protein, length: 727 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 29682
95 % 6 8 4138 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 0.9
PDBFlex
90 % 6 8 4165
70 % 6 8 4081
50 % 9 11 2865
40 % 9 11 2837
30 % 9 11 2649
Entity #2 | Chains: B,D
METHYLMALONYL-COA MUTASE BETA CHAIN protein, length: 637 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 8 3369
95 % 6 8 4141 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 6 8 4169
70 % 6 8 4085
50 % 6 8 3948
40 % 6 8 3789
30 % 6 8 3510

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.