Sequence Similarity Clusters for the Entities in PDB 1E1C

Entity #1 | Chains: A,C
METHYLMALONYL-COA MUTASE ALPHA CHAIN protein, length: 727 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30835
95 % 6 8 4304 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.1
PDBFlex
90 % 6 8 4331
70 % 6 8 4251
50 % 9 11 2972
40 % 9 11 2934
30 % 9 11 2748
Entity #2 | Chains: B,D
METHYLMALONYL-COA MUTASE BETA CHAIN protein, length: 637 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 8 3521
95 % 6 8 4307 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 6 8 4335
70 % 6 8 4255
50 % 6 8 4091
40 % 6 8 3918
30 % 6 8 3634

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.