Sequence Similarity Clusters for the Entities in PDB 1E12

Entity #1 | Chains: A
HALORHODOPSIN protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 72873
95 % 2 6 14483 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.9
PDBFlex
90 % 2 6 14286
70 % 2 6 13490
50 % 2 6 12210
40 % 2 6 11408
30 % 2 6 10453

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures