Sequence Similarity Clusters for the Entities in PDB 1E08

Entity #1 | Chains: A
[FE]-HYDROGENASE (LARGE SUBUNIT) protein, length: 371 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 33790
95 % 2 2 26987
90 % 2 2 26082
70 % 2 2 23666
50 % 2 2 20373
40 % 2 2 18056
30 % 2 2 15430
Entity #2 | Chains: D
[FE]-HYDROGENASE (SMALL SUBUNIT) protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 47092
95 % 2 2 35168
90 % 2 2 33611
70 % 2 2 29926
50 % 2 2 25595
40 % 2 2 22569
30 % 2 2 19109
Entity #3 | Chains: E
CYTOCHROME C553 protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 29377
95 % 1 4 20455
90 % 1 4 19890
70 % 2 5 13667
50 % 2 5 12143
40 % 2 5 11012
30 % 25 35 818

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.