Sequence Similarity Clusters for the Entities in PDB 1E08

Entity #1 | Chains: A
[FE]-HYDROGENASE (LARGE SUBUNIT) protein, length: 371 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 33205
95 % 2 2 26522
90 % 2 2 25639
70 % 2 2 23324
50 % 2 2 20114
40 % 2 2 17829
30 % 2 2 15243
Entity #2 | Chains: D
[FE]-HYDROGENASE (SMALL SUBUNIT) protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 46397
95 % 2 2 34660
90 % 2 2 33140
70 % 2 2 29549
50 % 2 2 25294
40 % 2 2 22305
30 % 2 2 18882
Entity #3 | Chains: E
CYTOCHROME C553 protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 28851
95 % 1 4 20051
90 % 1 4 19499
70 % 2 5 13413
50 % 2 5 11930
40 % 2 5 10810
30 % 21 31 866

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.