Sequence Similarity Clusters for the Entities in PDB 1E08

Entity #1 | Chains: A
[FE]-HYDROGENASE (LARGE SUBUNIT) protein, length: 371 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 34703
95 % 2 2 27688
90 % 2 2 26738
70 % 2 2 24203
50 % 2 2 20822
40 % 2 2 18451
30 % 2 2 15777
Entity #2 | Chains: D
[FE]-HYDROGENASE (SMALL SUBUNIT) protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 48267
95 % 2 2 36020
90 % 2 2 34398
70 % 2 2 30573
50 % 2 2 26125
40 % 2 2 23032
30 % 2 2 19509
Entity #3 | Chains: E
CYTOCHROME C553 protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 30164
95 % 1 4 20942
90 % 1 4 20360
70 % 2 5 14024
50 % 2 5 12439
40 % 2 5 11268
30 % 25 35 834

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures