Sequence Similarity Clusters for the Entities in PDB 1E08

Entity #1 | Chains: A
[FE]-HYDROGENASE (LARGE SUBUNIT) protein, length: 371 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 34262
95 % 2 2 27354
90 % 2 2 26426
70 % 2 2 23943
50 % 2 2 20595
40 % 2 2 18257
30 % 2 2 15610
Entity #2 | Chains: D
[FE]-HYDROGENASE (SMALL SUBUNIT) protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 47685
95 % 2 2 35600
90 % 2 2 34016
70 % 2 2 30253
50 % 2 2 25854
40 % 2 2 22800
30 % 2 2 19315
Entity #3 | Chains: E
CYTOCHROME C553 protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 29788
95 % 1 4 20707
90 % 1 4 20140
70 % 2 5 13849
50 % 2 5 12292
40 % 2 5 11141
30 % 25 35 829

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.