Sequence Similarity Clusters for the Entities in PDB 1E08

Entity #1 | Chains: A
[FE]-HYDROGENASE (LARGE SUBUNIT) protein, length: 371 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 32696
95 % 2 2 26113
90 % 2 2 25254
70 % 2 2 22995
50 % 2 2 19834
40 % 2 2 17581
30 % 2 2 15024
Entity #2 | Chains: D
[FE]-HYDROGENASE (SMALL SUBUNIT) protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 45690
95 % 2 2 34107
90 % 2 2 32633
70 % 2 2 29116
50 % 2 2 24940
40 % 2 2 21995
30 % 2 2 18618
Entity #3 | Chains: E
CYTOCHROME C553 protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 28420
95 % 1 4 19744
90 % 1 4 19211
70 % 2 5 13206
50 % 2 5 11770
40 % 2 5 10673
30 % 21 31 846

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.