Sequence Similarity Clusters for the Entities in PDB 1DZI

Entity #1 | Chains: A
INTEGRIN protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 64360
95 % 2 6 3679 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.8
PDBFlex
90 % 2 6 3742
70 % 2 6 3691
50 % 7 15 1910
40 % 7 15 1911
30 % 32 58 487
Entity #2 | Chains: B,C,D
COLLAGEN protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 7859
95 % 2 3 8417
90 % 2 4 6407
70 % 38 60 156
50 % 39 64 181
40 % 39 64 192
30 % 39 64 205

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures