Sequence Similarity Clusters for the Entities in PDB 1DZI

Entity #1 | Chains: A
INTEGRIN protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 66592
95 % 2 6 3598 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.3
PDBFlex
90 % 2 6 3674
70 % 2 6 3607
50 % 7 15 1917
40 % 7 15 1910
30 % 35 63 425
Entity #2 | Chains: B,C,D
COLLAGEN protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 30021
95 % 1 1 26182
90 % 1 1 25256
70 % 1 1 22880
50 % 1 1 19641
40 % 1 1 17348
30 % 1 1 14537

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures