Sequence Similarity Clusters for the Entities in PDB 1DZB

Entity #1 | Chains: A,B
SCFV FRAGMENT 1F9 protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38404
95 % 1 1 29706 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 28674
70 % 7 17 1848
50 % 1350 4713 1
40 % 1350 4713 1
30 % 1510 5567 1
Entity #2 | Chains: X,Y
TURKEY EGG-WHITE LYSOZYME C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 12 4105
95 % 9 13 4487 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 601 730 5
70 % 806 950 7
50 % 811 958 8
40 % 832 992 11
30 % 832 992 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.