Sequence Similarity Clusters for the Entities in PDB 1DZ5

Entity #1 | Chains: A,B
U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 59 60 235
95 % 62 63 311
90 % 62 63 330
70 % 64 65 349
50 % 64 65 406
40 % 64 65 443
30 % 64 65 437
Entity #2 | Chains: C,D
PIE, RNA (5'-R(*GP*AP*GP*AP*CP*AP*UP*UP*GP*CP*AP*CP*CP* CP*GP*GP*AP*GP*UP*CP*UP*C)-3') rna, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.