Sequence Similarity Clusters for the Entities in PDB 1DY8

Entity #1 | Chains: A,B
PROTEASE/HELICASE NS3 (P70) protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 5417
95 % 16 25 754 Flexibility: Low
Max RMSD: 8.3, Avg RMSD: 1.3
PDBFlex
90 % 16 25 781
70 % 59 89 248
50 % 59 89 270
40 % 59 89 282
30 % 59 89 296
Entity #2 | Chains: C,D
NONSTRUCTURAL PROTEIN NS4A (P4) protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures