Sequence Similarity Clusters for the Entities in PDB 1DY6

Entity #1 | Chains: A,B
CARBAPENEM-HYDROLYSING BETA-LACTAMASE SME-1 protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38668
95 % 1 1 32751 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 31356
70 % 3 3 16517
50 % 287 338 76
40 % 310 370 61
30 % 317 378 71

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures