Sequence Similarity Clusters for the Entities in PDB 1DY6

Entity #1 | Chains: A,B
CARBAPENEM-HYDROLYSING BETA-LACTAMASE SME-1 protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38586
95 % 1 1 30005 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 28946
70 % 3 3 16399
50 % 283 332 70
40 % 306 364 55
30 % 312 371 72

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures