Sequence Similarity Clusters for the Entities in PDB 1DY1

Entity #1 | Chains: A
COLLAGEN ALPHA1(XVIII) CHAIN protein, length: 188 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28169
95 % 2 3 23425 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 2 3 22657
70 % 2 4 9902
50 % 3 5 8082
40 % 3 5 7419
30 % 3 5 6539

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.