Sequence Similarity Clusters for the Entities in PDB 1DY0

Entity #1 | Chains: A
COLLAGEN ALPHA1(XVIII) CHAIN protein, length: 188 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 28573
95 % 3 3 23755 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 3 3 22961
70 % 3 4 10033
50 % 4 5 8181
40 % 4 5 7509
30 % 4 5 6616

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures