Sequence Similarity Clusters for the Entities in PDB 1DXP

Entity #1 | Chains: A,B
PROTEASE/HELICASE NS3 (P70) protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 5139
95 % 13 25 716 Flexibility: Low
Max RMSD: 8.3, Avg RMSD: 1.3
PDBFlex
90 % 13 25 746
70 % 50 89 233
50 % 50 89 254
40 % 50 89 271
30 % 50 89 279
Entity #2 | Chains: C,D
NONSTRUCTURAL PROTEIN NS4A (P4) protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.