Sequence Similarity Clusters for the Entities in PDB 1DXM

Entity #1 | Chains: A,B
H PROTEIN protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 16149
95 % 3 3 15020 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 3 14710
70 % 3 3 13758
50 % 3 3 12177
40 % 15 18 2309
30 % 17 20 1882

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures