Sequence Similarity Clusters for the Entities in PDB 1DXL

Entity #1 | Chains: A,B,C,D
DIHYDROLIPOAMIDE DEHYDROGENASE protein, length: 470 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 17606
95 % 1 1 16089 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.9
PDBFlex
90 % 1 1 15792
70 % 1 1 14783
50 % 22 22 636
40 % 30 31 510
30 % 118 128 162

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures