Sequence Similarity Clusters for the Entities in PDB 1DWU

Entity #1 | Chains: A,B
RIBOSOMAL PROTEIN L1 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41897
95 % 1 1 35207 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 1 33649
70 % 4 5 10296
50 % 4 7 7223
40 % 4 13 4092
30 % 26 210 218

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4LQ4 1 A 50S ribosomal protein L1 2190
2 1I2A 1 A 50S RIBOSOMAL PROTEIN L1P 2190
3 1CJS 1 A 50S RIBOSOMAL PROTEIN L1P 2190
4 1DWU 1 A, B RIBOSOMAL PROTEIN L1 2186
5 1U63 2 A, C 50S ribosomal protein L1P 2190
6 4D67 43 u 60S RIBOSOMAL PROTEIN L10A 9986
7 4D5Y 43 u 60S RIBOSOMAL PROTEIN UL1 9986
8 4UJC 49 Bu 60S RIBOSOMAL PROTEIN L10A 9986
9 4UJD 46 Au 60S RIBOSOMAL PROTEIN L10A 9986
10 4UJE 80 Cu 60S RIBOSOMAL PROTEIN L10A 9986
11 4V4N 41 AA 50S ribosomal protein L1P SEE REMARK 999 2190
12 4V6U 46 BA 50S ribosomal protein L1P 2261
13 4V5Z 85 B5 60S Ribosomal protein L10a 9612